Ok, I got the Qolsys and Logitech Harmony Hub Extender to work together… Not sure it is the ideal method, but it works.
Qolsys needed to be the primary. I deleted all devices from both the Qolsys and the Logitech. I then reset each to a new individual Z-wave network. I then had the Logitech scan for Z-wave Devices, then selected add device on the Qolsys panel. The Qolsys found the Logitech quickly as an Other Device. The Logitech showed it could not pair… But there it was listed on the Qolsys. I then started adding Lights, Plugs…etc to the Qolsys… Each one also showed up in the Logitech Harmony App. Everything is working perfectly. After syncing the Harmony Touch Remote with the Harmony Hub… The Harmony Touch Remote also shows and works with the Z-Wave devices.
Thanks for the help Jason. I will keep this thread up to date with things good and bad I encounter.